Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015832901.1_cds_XP_016505045.1_18426
CDS Infomation

[gene=LOC107822976] [db_xref=GeneID:107822976] [protein=uncharacterized RING finger protein P8B7.15c-like] [protein_id=XP_016505045.1] [location=complement(join(11566..11659,12085..12207,12425..12695,12824..12865,12999..13301,13404..13568,13756..13904,13980..14136,14251..14316,14809..14897,15104..15270,15371..15452,15972..16083,17016..17181))] [gbkey=CDS]
Sequence

ATGGCAGTTTATTTTAAGTTTAAAAGTGCAAAAGATTATGATTCAATAGCAATTGACGGT
CACTTTATTACTGTTGGGAATTTGAAAGAAAAAATATTTGAATCCAAGCATCTAGGCAGG
GGTACAGATTTTGACCTCGTTGTCACCAACGCCCAGTCTAACGAAGAATATCTTGATGAG
GACACCTTGATCCCCAAAAATACTAGTGTTTTGATTCGTCGTGTTCCTGGACGACCTCGC
ATGCCCATAGTAACTGCACCTGTAGCAGAACCAGACGAGCCCAAAGTAGAATACCAATCT
GAGGAGGCTCAAACAGTAAAAAGTAGTTATCTGGGAGGGGAGTCATCTGCCACCAAATAT
CCTGAAGATCTAGATTGGGATGAATTTGGGAATGATTTGTACGCTATTCCTGAAGCAACG
CCAGTTCAGTCAAGCAACCAAGTGCAGGATGCTCCTCCTCCAAGCAAAGCTGACGAGGAG
AGTAAGATCAAAGCTTTAATTGACACTCCAGCGTTGGATTGGCAGAGTCAACCCTCTGAT
GGCTTTGGTGCTGGTAGAGGTTATGGACGAGGTCCAGGTGGAAGAATGATGGGTGGACGT
GGTGGACGAGGCTTTGGTTGGGGTGGATTGGAACGGAAAACACCACCACCGGGCTATGTA
TGCCATCGTTGTAAGGTGCCTGGGCATTTCATCCAGCACTGCCCAACAAATGGTGACCCA
AATTATGACATTAAGAAAGTGAAACCTCCAACTGGCATTCCAAAGTCCATGTTGATGGCA
ACCCCAGATGGTTCATATGCTTTACCAAGTGGTGCTGTTGCAGTTTTAAAGCCCAATGAG
GCTGCTTTTGATAGAGAAGTTGAAGGGATGCCTTCTATACGCTCCGTTGGTGATCTTCCA
CCAGAACTTCATTGTCCCTTGTGTAAAGAAGTAATGAAAGATGCGGTGCTAACAAGCAAG
TGTTGTTTTACGAGTTTCTGCGATAAATGCATAAGGGATTATATCATCTCAAAGTTGATG
TGCATCTGTGGGGCCACAAGTATACTTGCTGATGACCTGTTGCCTAACAAGACTTTGAGG
GATACAATAAATAGAATACTGGAATCAAATAATAGCAGTGCAGAGCATGGGGGTAGTGCT
CTTCAAGTTCAAGATATGGAGTCAGCACGCAATCTCCCACCTAAGATTCCATCTCCTTCA
CAATCTGCAGCTTCAAGGGGAGAGCTGTTGCCACCACCTTCTCATAAGGAGGAAACTTCT
AAAGTCCAGGAGACTGCTGAGGAGGGTAAGAATGGCAGTGCACCACAGCAAATGGTGGAG
AGAGGCAGGACTTCGAAGGTTGCAGATATTTCTGAAGCCACACATGAGTCAGTTAGTGTT
AAAGAACCTGCATCCCAGGGAAGTGCTCCATTGGCTGATGAAGAAGTTCAACAAAAGCAT
GTAGCTGCGGAGGCAGCAAAGAAAAAGAAGAAGAAGAAAGCACGCCTGCCATTGAACCCT
GCTGTTGCGGAGATGCAGTGGAGAGCTGCTCAAGATCATCTCGCTGCTGAGAATTACATG
ATGTCCATGGGTCCTTCTGCGTATAATAATCCTTATTGGACAGGCATGCAACCTGGACTA
GATGGGTTTGCAGCCCCTTATCATGGTGCCATGCCGTACAATCCTTATGGGTTTGGCCCT
CTAGATGTTCCATTTGTCCCTCCTGTCTTACCACAAGATCCATTTGGTGGACAAGGTTTT
ATGTTGCCTTTCGGTCCTCCAATGCAGAGGGATCTTGCAGCAGAGTTTGGGATGGGATTT
AATGCTGGCCCACCAATCATGAGCAGAGAAGAGTTCGAGGCTAGAAAGGCTGATCTGAAA
AGGAAGCGTGAGATCGAGAGACGGGGAGAGAGGGAGTTCTCTAAAGACAGGGAACATGCA
AGGGAAGTTGGCAGCGGTGCTGATGGTCCTTCCNAAAAAAAGCAGTCTCAGAGATTGAAT
TTCTAG

Peptide Sequence

PEP ID

XP_016505045.1
PEP Infomation

PREDICTED: uncharacterized RING finger protein P8B7.15c-like [Nicotiana tabacum]
Sequence

MAVYFKFKSAKDYDSIAIDGHFITVGNLKEKIFESKHLGRGTDFDLVVTNAQSNEEYLDE
DTLIPKNTSVLIRRVPGRPRMPIVTAPVAEPDEPKVEYQSEEAQTVKSSYLGGESSATKY
PEDLDWDEFGNDLYAIPEATPVQSSNQVQDAPPPSKADEESKIKALIDTPALDWQSQPSD
GFGAGRGYGRGPGGRMMGGRGGRGFGWGGLERKTPPPGYVCHRCKVPGHFIQHCPTNGDP
NYDIKKVKPPTGIPKSMLMATPDGSYALPSGAVAVLKPNEAAFDREVEGMPSIRSVGDLP
PELHCPLCKEVMKDAVLTSKCCFTSFCDKCIRDYIISKLMCICGATSILADDLLPNKTLR
DTINRILESNNSSAEHGGSALQVQDMESARNLPPKIPSPSQSAASRGELLPPPSHKEETS
KVQETAEEGKNGSAPQQMVERGRTSKVADISEATHESVSVKEPASQGSAPLADEEVQQKH
VAAEAAKKKKKKKARLPLNPAVAEMQWRAAQDHLAAENYMMSMGPSAYNNPYWTGMQPGL
DGFAAPYHGAMPYNPYGFGPLDVPFVPPVLPQDPFGGQGFMLPFGPPMQRDLAAEFGMGF
NAGPPIMSREEFEARKADLKRKREIERRGEREFSKDREHAREVGSGADGPSXKKQSQRLN
F

Transcript Sequence

Gene sequence data has not been registered.